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  1. UpdatesAug 22, 2025

    Shelby Andersen (University of Colorado Anschutz Medical Campus) and colleagues published a new paper on systematic phage gen

    Shelby Andersen (University of Colorado Anschutz Medical Campus) and colleagues published a new paper on systematic phage gene function interrogation, showing PhageMaP enables high-throughput screening of phage mutant libraries to decipher

    UpdatesResearch paperBioinformatic toolHigh throughput
  2. UpdatesMay 17, 2024

    Chutikarn Chitboonthavisuk (University of Wisconsin-Madison) and colleagues published a new preprint on systematic genome-wid

    Chutikarn Chitboonthavisuk (University of Wisconsin-Madison) and colleagues published a new preprint on systematic genome-wide discovery of host factors governing phage infectivity. They describe 'PHAGEPACK', a novel assay combining CRISPR

    UpdatesPhage-host interactionsBioinformatic toolPreprint
  3. UpdatesMay 10, 2024

    Wanangwa Ndovie (Jagiellonian University) and colleagues published a new preprint on rapid, accurate estimation of genetic re

    Wanangwa Ndovie (Jagiellonian University) and colleagues published a new preprint on rapid, accurate estimation of genetic relatedness between millions of viral genome pairs using a new tool called MANIAC.

    UpdatesBioinformatic toolViral Genomics
  4. UpdatesMar 29, 2024

    Ruo Han Wang (City University of Hong Kong) and colleagues published a paper on PhageScope: a new online phage database with

    Ruo Han Wang (City University of Hong Kong) and colleagues published a paper on PhageScope: a new online phage database with comprehensive annotations comprising 873,718 phage sequences. It provides annotations on genome completeness, host

    UpdatesPhage DatabaseVisualizationsBioinformatic Tool
  5. UpdatesJul 28, 2023

    Check out iPHoP, a new program that combines and evaluates predictions to reliably match phages with their archaea and bacter

    Check out iPHoP, a new program that combines and evaluates predictions to reliably match phages with their archaea and bacteria hosts.

    UpdatesBioinformatic toolPhage-host interactions
  6. UpdatesMay 12, 2023

    Phables is a new method to resolve phage genomes from fragmented viral metagenomic assemblies. This article by Vijini Mallawa

    Phables is a new method to resolve phage genomes from fragmented viral metagenomic assemblies. This article by Vijini Mallawaarachchi and colleagues shows how Phables identifies phage-like components, models each component, and identifies g

    UpdatesBioinformatic toolPhage genomics
  7. UpdatesFeb 10, 2023

    A new paper by Jan Finke (Hakai Institute, Canada) and colleagues describes Deep6, a deep learning model for classification o

    A new paper by Jan Finke (Hakai Institute, Canada) and colleagues describes Deep6, a deep learning model for classification of metatranscriptomic sequences into prokaryotes, eukaryotes, or one of the four viral realms (Duplodnaviria, Varidn

    UpdatesMachine LearningTaxonomyBioinformatic Tool

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