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  1. UpdatesJan 31, 2025

    Are you my host? Paul Hyman (Ashland University) published a new paper on methods for linking phages with hosts, showing grow

    Are you my host? Paul Hyman (Ashland University) published a new paper on methods for linking phages with hosts, showing growth-based, genome sequence-based, and proximity-based approaches each measure different aspects of phage-host intera

    UpdatesPhage-host interactionsHost predictionReview
  2. UpdatesNov 5, 2021

    WIsH predicts the hosts of phages from their genomic sequences. It achieves 63% mean accuracy when predicting the host genus

    WIsH predicts the hosts of phages from their genomic sequences. It achieves 63% mean accuracy when predicting the host genus among 20 genera for 3 kbp-long phage contigs. WisH is also fast and accurate on phage sequences of a few kbp, makin

    UpdatesBioinformatics ToolHost predictionMetagenomicsPhage genomics
  3. UpdatesSep 17, 2021

    Andrzej Zielezinski (Adam Mickiewicz University, Poland) and colleagues published a new preprint describing PHIST, a fast and

    Andrzej Zielezinski (Adam Mickiewicz University, Poland) and colleagues published a new preprint describing PHIST, a fast and accurate prediction of prokaryotic hosts from metagenomic viral sequences.

    UpdatesBioinformatics ToolHost predictionMetagenomicsPreprint
  4. UpdatesJun 18, 2021

    Clément Coclet and Simon Roux (DOE Joint Genome Institute) published a review in Current Opinion in Virology on major challen

    Clément Coclet and Simon Roux (DOE Joint Genome Institute) published a review in Current Opinion in Virology on major challenges of host prediction methods for uncultivated phages. They highlight different approaches, giving their distinct

    UpdatesBioinformatics ToolHost predictionResearch paperUncultivated phages

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