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  • Master 2 internship in marine viral ecology and bioinformatics — BEEP, Plouzané (France)
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  • PRAN Virtual Undergraduate Phage Research Symposium 2026: call for abstractsOct 23, 2026

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Ep 18: Discussion of Phage Therapy for CF Patients - Rebekah Dedrick

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  • Q&A: Favorite phage production equipment

    Issue 323Jessica Sacher

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231 news items

  • Tulane Ventures invests $250,000 in Biophoundry to advance engineered phage therapies

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  • Phage prohead proteases activate CBASS antiphage immunity (Science)

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  1. Updates

    Phold annotates phage genomes using protein structures

    Phold annotates bacteriophage genomes and metagenomes using protein structural homology. Its README describes translating protein sequences to Foldseek’s 3Di alphabet with ProstT5 before searching protein structures. Phold

    UpdatesToolsBioinformaticsPhage Genomics
  2. Opportunities

    BioTuring AI/bioinformatics fellowship: October 26 deadline

    The three-month fellowship develops and deploys AI systems for life-science applications, with mentorship, a VND 11 million monthly full-time allowance and approximately US$15,000 per month in computing resources. Fellows can work in Ho Chi

    OpportunitiesFundingAIBioinformaticsTraining
  3. Updates

    PhaMer identifies phages in metagenomic data

    PhaMer is a Python library that identifies bacteriophages in metagenomic data using a Transformer model and protein-based vocabulary. The repository says development moved to PhaBOX 2 and that this folder will no longer be maintained. PhaMe

    UpdatesToolsBioinformaticsPhage Biology
  4. News

    PhageBench: benchmark for LLM understanding of phage genomes

    PhageBench contains 5,600 samples across phage screening, quality control and phenotype annotation tasks. Its evaluation found stronger-than-random performance on some tasks and limitations in complex sequence reasoning. ACL Anthology

    NewsPapersToolsAIBioinformaticsPhage BiologyPhage Genomics
  5. Opportunities

    NIH computational genomics and data science R01: closed 2026 opportunity

    PAR-25-228 supported investigator-initiated innovation in computational genomics and data science through the R01 mechanism, with clinical trials not allowed. The official grant record lists September 4, 2026 as its closing date. NIH

    OpportunitiesFundingBioinformatics
  6. News

    IBRT presents Arthrobacter phage AnnabelLee genome research at NISPET-Ibadan 2026

    Temiloluwa Akintade and Bello Abdul Hakeem presented genome annotation and characterization of Arthrobacter phage AnnabelLee at NISPET-Ibadan 2026 at the University of Ibadan. The work combined automated annotation with manual curation usin

    NewsBioinformaticsPhage Genomics
  7. Updates

    PBI-Scope v0.5.0 adds PhageScope GFF3 information

    PBI-Scope v0.5.0 adds PhageScope GFF3 information to the pbi package. PBI-Scope GitHub release v0.5.0

    UpdatesToolsBioinformatics
  8. Updates

    PhageHostLearn predicts phage–host interactions

    PhageHostLearn provides pairwise machine-learning models for phage–host interaction prediction, with code for training models, reproducing the study, or making new predictions. PhageHostLearn

    UpdatesToolsPhage host predictionBioinformatics
  9. Updates

    PhageDPO paper introduces a Galaxy tool for predicting phage depolymerases

    The paper introduces PhageDPO, a machine-learning tool available in Galaxy for identifying depolymerases in phage and prophage genomes. The authors say the source code is on GitHub. Computers in Biology and Medicine article

    UpdatesPapersToolsDepolymerasesBioinformatics
  10. Opportunities

    CNPq biotechnology research: 2026 closed call

    CNPq’s call 24/2026 supported biotechnology across human health, agriculture, industry, environment and energy. Its bioinformatics line included omics, modelling, biological databases and applied AI, with R$500,000–R$5 million per project i

    OpportunitiesFundingAIBioinformatics
  11. Opportunities

    Beyond AI DGX SuperPOD research call: January 2025 archive

    Beyond AI invited University of Tokyo research groups to use NVIDIA DGX SuperPOD resources and seek project research support. The call was restricted to university-employed faculty and researchers and closed on January 20, 2025 at 6pm. Beyo

    OpportunitiesFundingComputeBioinformaticsAI
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