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  • Phage prohead proteases activate CBASS antiphage immunity (Science)

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  1. UpdatesJun 19, 2026

    The biology of jumbo phages (Nature Communications Review)

    A Nature Communications Review by Sam P. B. van Beljouw and Li Yuping (Biozentrum, University of Basel) on jumbo bacteriophages, whose double-stranded DNA genomes exceed 200 kb. It covers their diversity, evolutionary origins, distinctive m

    UpdatesPapersReviewPhage Biology
  2. UpdatesJun 18, 2026

    A meta-analysis of infant gut viromes reveals global patterns in bacteriophage community assembly and functional capacity over the first three years of life

    A meta-analysis of 12 infant cohorts across 8 countries (1,893 samples from 999 infants) models gut virome development over the first three years of life. Viral richness rose significantly over the first eight months alongside a loss of com

    UpdatesPapersMicrobiomePhage Biology
  3. UpdatesJun 12, 2026

    Bacteriophages hijack 2′,3′-cNMPs to enhance transposase-mediated phage DNA integration in Acinetobacter baumannii (Science Advances)

    Cui and colleagues report in Science Advances that Acinetobacter baumannii makes 2′,3′-cyclic nucleotide monophosphates (2′,3′-cNMPs) with the ribonuclease RnaA and senses them through the receptor protein CRPAb, which affects the interacti

    UpdatesPapersPhage Biology
  4. UpdatesJun 10, 2026

    Sequential use of capsule-targeting Klebsiella phages shows order-dependent effects

    In this preprint, a 1:1 Loop and Spear cocktail did not improve bacterial suppression over Loop alone and showed multiplicity-dependent antagonism. In a Galleria mellonella larvae infection model, only sequential treatment with Spear follow

    UpdatesPapersPhage CocktailsKlebsiella
  5. UpdatesJun 4, 2026

    Prevalent gut phages encode modular adhesins mediating epithelial binding and endoplasmic reticulum trafficking

    A high-throughput platform identified gut phages that adhere to epithelial layers and the immunoglobulin (Ig)-like domain proteins that mediate it: displayed on a non-adherent phage, they confer epithelial binding and internalization in vit

    UpdatesPapersMicrobiomePhage Biology
  6. UpdatesMay 30, 2026

    Single-phage profiling illuminates viral individuality during bacterial cell fate determination

    Parallel sequential fluorescence in situ hybridization (par-seqFISH) profiled the transcriptional activity of individual phage lambda genomes during synchronized infection of E. coli. Cells pursuing lysogeny show consensus activity among al

    UpdatesPapersPhage Biology
  7. UpdatesMay 29, 2026

    Theomophage: massive, parallel phage outbreaks in cellulose-degrading compost microbial communities (Science Advances)

    Meijer, Skiadas, Rainey, Hogeweg and Dutilh tracked viral dynamics in 20 compost-derived microbial communities over one year and observed massive, parallel outbreaks of Theomophage, a previously uncharacterized member of the Schitoviridae t

    UpdatesPapersPhage Biology
  8. UpdatesMay 28, 2026

    Single nucleotide variants drive evolutionary phage-host arms race in anaerobic carbon dioxide-converting microbiome

    Metagenomics, metatranscriptomics and metabolic modelling followed a thermophilic CO2-converting (biomethanation) trickle bed reactor over 353 days of stepwise gas-feed perturbations, tracking single nucleotide variant trajectories in both

    UpdatesPapersMicrobiomePhage Biology
  9. UpdatesMay 22, 2026

    DepoCatalog maps Klebsiella phage depolymerases and introduces the DepoCat database

    The study presents DepoCatalog, an experimentally validated collection of 129 recombinantly prepared Klebsiella phage depolymerases across 75 KL-types, and proposes a five-class framework for their diversity. The accompanying DepoCat databa

    UpdatesPapersToolsDepolymerasesKlebsiellaBioinformatics
  10. UpdatesMay 21, 2026

    Science feature "Brothers in arms": key human defenses against pathogens were forged in microbial battles with viruses

    Science news feature by Richard Stone (Science 392, issue 6800, May 21, 2026, pp. 800-804), whose standfirst states that key human defenses against pathogens were forged billions of years ago in microbial battles with viruses. Science — "Br

    UpdatesPapersPhage Biology
  11. UpdatesMay 20, 2026

    Phage infectivity prediction across Pseudomonas isolates

    Researchers profiled 95 Pseudomonas phages against 99 clinical isolates and trained strain-specific models to predict infectivity. In a single held-out strain in vivo, the model-designed cocktail produced a higher median CFU reduction than

    UpdatesPapers
  12. UpdatesMay 19, 2026

    PHAGE4DAIR: €14.9 million Horizon Europe trial of phage therapy for Staphylococcus aureus prosthetic joint infections

    PHAGE4DAIR, a Horizon Europe project coordinated by Qeen Biotechnologies (Canada), runs from 1 June 2026 to 31 May 2031 with an EU contribution of €14,869,038.73. It is a multicenter, randomized, double-blind, placebo-controlled, adaptive P

    UpdatesFundingPapersClinical TrialsPhage Therapy
  13. UpdatesMay 18, 2026

    Cross-genus phage design through branching domain and conserved peptide interactions

    Using the Klebsiella podophages KP32, K11 and KP34, the authors validated the interaction between the primary RBP branching domain and the secondary RBP docking peptide. They used this interaction to engineer a KP32 scaffold that propagated

    UpdatesPapersPhage EngineeringHost Range
  14. UpdatesMay 18, 2026

    Phage-encoded factor stimulates DNA degradation by the Hna anti-phage defense system

    Biochemistry, cryo-electron microscopy and single-molecule imaging show that Hna, a broadly distributed anti-phage system that triggers abortive infection, is a 3'-5' single-stranded DNA exonuclease forming an auto-inhibited dimer under phy

    UpdatesPapersPhage Biology
  15. UpdatesMay 13, 2026

    Structural investigation of QatB and QatC proteins in QatABCD anti-phage defense

    A structural and functional study of QatB and QatC, two components of the four-protein QatABCD anti-phage defense system. QatC bound to the ATP analog AMPPNP and the QatB-QatC heterodimer were solved, and structural analysis suggests QatB m

    UpdatesPapersPhage Biology
  16. UpdatesMay 12, 2026

    Phage satellites induced by virulent phages are mobilized by natural competence leading to phage resistance in a new host

    More than two-thirds of Streptococcus thermophilus strains harbor a phage satellite structurally similar to Staphylococcus aureus pathogenicity islands (SaPIs). Virulent phages can trigger induction of these satellites, and their DNA can th

    UpdatesPapersPhage Biology
  17. UpdatesMay 8, 2026

    The honey bee triad: a comprehensive catalogue of phages in the Apis mellifera gut microbiome

    A metagenomic study of 450 virus-enriched honey bee gut samples from 63 hives across eight European countries, three seasons and three gut sections catalogues a diverse phageome, including many phages that appear to belong to novel taxa and

    UpdatesPapersPhage GenomicsMicrobiome
  18. UpdatesMay 7, 2026

    Nature Communications Perspective: moving phage therapy beyond anecdote to clinical reproducibility

    A Nature Communications Perspective by Aleksandra Petrović-Fabijan and Stephen T. Abedon argues that phage therapy must move beyond anecdote to clinical reproducibility, and identifies three foundational pillars to be addressed through inte

    UpdatesPapersPhage TherapyReview
  19. UpdatesMay 1, 2026

    Bridging continuous and discrete evolution through a controllable, hypermutagenic phage-bacteria system

    Lytic selection and evolution (LySE) is a T7-based method for near-continuous directed evolution of bacterial gene clusters that keeps discrete checkpoints: a hypermutagenic T7 DNA polymerase mutates a target gene cluster carried on a T7 ph

    UpdatesPapersPhage Engineering
  20. UpdatesApr 28, 2026

    V- and VL-scores unveil viral signatures and origins of protein families

    V-score and VL-score are annotation-free metrics that quantify the "virus-likeness" of protein families and genomes, released with an open-access searchable database, V-Score-Search. Applied to public protein databases they link 19-59% of p

    UpdatesPapersBioinformaticsVirology
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